Publications:

Han D, Schaffner SH, Davies JP, Benton ML, Plate L, Nordman JT, 2023 PNAS 120(39):e2305092120 PMCID: PMC10523488 https://www.pnas.org/doi/10.1073/pnas.2305092120

Tirgar R, Davies JP, Plate L, Nordman JT, 2023 The histone chaperone NASP maintains H3-H4 reservoirs in the early Drosophila embryo. PLoS Genetics 19(3):e1010682 https://doi.org/10.1371/journal.pgen.1010682

Richards L, Lord C, Benton ML, Capra JA and Nordman JT, 2022 Nucleoporins facilitate ORC loading onto chromatin. Cell Reports 41(6):111590 https://doi.org/10.1016/j.celrep.2022.111590

Munden A, Benton ML, Capra JA, Nordman JT, 2021 R-loop mapping and characterization during Drosophila embryogenesis reveals developmental plasticity in R-loop signatures. JMB 434(13):167645 https://doi.org/10.1016/j.jmb.2022.167645

 

Munden A, Wright M, Han D, Tirgar R, Plate L and Nordman JT, 2022 Identification of replication fork-associated proteins in Drosophila embryos and cultured cells using iPOND coupled to quantitative mass spectrometry. Scientific Reports 12:6903 https://doi.org/10.1038/s41598-022-10821-9

 

*Richards L, *Das S and Nordman JT, 2022 Rif1-dependent control of replication timing. Genes 13(3): 550

 

Das S, Caballero M, Kolesnikova T, Zhimulev I, Koren A and Nordman JT, 2021 Replication timing analysis in polyploid cells reveals Rif1 uses multiple mechanisms to promote underreplication in Drosophila. Genetics 219:iyab147

*Armstrong RL, *Das S, Hill CA Duronio RJ and Nordman JT, 2020 Rif1 functions in a tissue-specific manner to control replication timing through its PP1-binding motif. Genetics 215: 75-87

 

Munden A, Rong Z, Sun A, Gangula R, Mallal S and Nordman JT, 2018 Rif1 inhibits replication fork progression and controls DNA copy number in Drosophila. eLife. 7. pii: e39140. doi: 10.7554/eLife.39140. 

 

Nordman JT and Orr-Weaver T.L., 2015 Understanding replication fork progression, stability, and chromosome fragility by exploiting the Suppressor of Underreplication protein. Bioessays 37: 856-61

 

Nordman JT, Kozhevnikova E, Verrijzer P, Pindyurin A, Andreyeva E, Shloma V, Zhimulev I, and Orr-Weaver T.L., 2014 DNA Copy Number Control Through Inhibition of Replication Fork Progression. Cell Reports. 9:841–849

 

Nordman JT and Orr-Weaver T.L., 2012 Developmental Control of Metazoan DNA Replication. Development. 139:455-464

 

Sher, N., Bell, G.W., Li, S., Nordman JT, Eng, T., Eaton, M.L, MacAlpine, D.M. and Orr­Weaver, T.L. 2012 Developmental Control of Gene Copy Number by Repression of Replication Initiation and Fork Progression. Genome Research. 22:64-75

Nordman J and Wright A, 2011 E. coli NDP Kinase mutants depend on translesion DNA synthesis to prevent mutagenesis. J. of Bacteriology 193:4531-4533

Kim, J. C., Nordman, J., Xie, F., Kashevsky, H., Eng, T., Li, S., MacAlpine, D.M. and Orr-Weaver, T.L., 2011. Integrative analysis of gene amplification in Drosophila follicle cells: Parameters of origin activation and repression. Genes and Development 25:1384-1398

 

Nordman J, Li S, Eng T, MacAlpine D and Orr-Weaver T, 2011 Developmental Control of the Relationship Between Replication and Transcription. Genome Research 21:175-181

 

modENCODE Consortium, Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X, Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, Minoda A, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A, Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, Yang L, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B, Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA, Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW, Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP and Kellis M., 2010 Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science 330:1787-1797

 

Nordman J and Wright A, 2008 The relationship between dNTP pool levels and mutagenesis in an Escherichia coliNDP kinase mutant. Proc. Natl. Acad. Sci. USA 105:10197-202

 

Nordman JT, Skovgaard O and Wright A, 2007 A novel class of mutations that affect DNA replication in E. coli. Molecular Microbiology. 64:125-38

 

Dineen SS, Villapakkam AV, Nordman JT and Sonenshein AL, 2007 Repression of Clostridium difficile toxin gene expression by CodY. Molecular Microbiology. 66: 206-19

 

*Renzette N, *Gumlaw N, *Nordman JT, Krieger M, Yeh SP, Long E, Centore R, Boonsombat R and Sandler SJ. 2005. Localization of RecA in Escherichia coli K-12 using RecA-GFP. Molecular Microbiology 57:1074-85 

*Contributed equally to work.